Measure soft wheat berries and spelt if you choose to use. (I use a 50-50 mix.) Mill the wheat into a fine flour.
Add the baking powder, baking soda, and salt to the flour in a small bowl, and mix well. Set aside.
Melt butter in a saucepan until almost melted. Turn off the heat. Stir the last few seconds to finish melting the butter without overheating. Cool the melted butter to 100 to 110℉. Pour the butter into a mixing bowl.
Add sugars, mix until creamy. Add one egg at a time, stirring until just combined. Stir in vanilla.
Fold the dry ingredients into the wet ingredients until just blended; it may still be floury. Gently fold in the chocolate chips until just mixed. If using an electric mixer, I pulse the mixer to gently mix in the chocolate chips.
Using a cookie scoop, measure equal-sized portions of dough. Roll the dough into cookie balls. Chill the cookie dough balls for at least 2 hours.
Preheat oven to 375 degrees. Place cookies on lined baking sheet. Bake cookies for 10-12 minutes until lightly golden.
Cool cookies for a few minutes on the baking sheet. Transfer to a cooling rack and cool completely.
Store in air-tight container for up to one week.